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Interdisciplinary Biomedical Research Program (IBRP)

 
   
 

Emilia Entcheva , Ph.D.
Assistant Professor of Biomedical Engineering, Physiology and Biophysics

Designing and characterizing heart cell networks and functional heart tissue in the lab is the focus of the Cardiac Cell Engineering Laboratory. We are motivated to provide useful tools for physiomics type of studies, drug and gene therapy testing platforms, an experimental setting for validation of computer models of excitable tissue, and ultimately to contribute to strategies for regeneration of the heart. This research is multidisciplinary by nature and involves a spectrum of experimental molecular and cell biology procedures, along with application of design concepts from electrical, optical, mechanical and chemical engineering to create the enabling technology for our studies. Image processing algorithms and computer modeling are essential complementary tools, developed and applied by our team.

Figure 1. Engineered cardiac cell construct in our lab, showing mature cytoskeletal organization (A), when grown on microtextured elastic guiding surface (B). Normal electrical activity (action potentials and intracellular calcium) and mechanical activity (uniaxial strain) were recorded by fluorescence techniques (C). Electrical propagation map (activation times) during an ectopic beat (D) and mechanical map, represented by streamlines of contraction (E), were reconstructed using image-processing algorithms. Arrow indicates the direction of the grooves.

A non-exhaustive list of current projects, which IBRP students can participate in include:

  1. Growing functional cardiac tissue in the lab: scaffold development, cell-scaffold responses, functional performance.
  2. Arrhythmias in a dish and in silico: fluorescent mapping of propagation of electrical waves in engineered cardiac tissue and computer modeling of the same process.
  3. High-resolution electromechanical mapping in engineered cardiac tissue using fluorescence-based techniques: development of optical mapping equipment; advanced image processing algorithms applied to assess structure and function in engineered cardiac tissue.
  4. Microfabrication of scaffolding for cell growth: the use of non-conventional methods and materials for designing 3D cell growth platforms, microfluidics channels, wavy fibers etc.
  5. Cardiac cell self-organization: how do excitable and contractile cells respond to surface topography?
  6. Non-invasive continuous optical measurements of oxygen levels in engineered cardiac tissue.

Student Background: We are looking for highly motivated undergraduate students with a strong engineering and math background. Computer programming skills in C/C++ and MATLAB are desirable. Biology background and training in experimental procedures could be acquired during the course of the project. Ideal candidates are undergraduates majoring in Electrical Engineering, Computer Science, Applied Math, Physics, Physiology or Biomedical Engineering with strong analytical skills and willing to tackle biomedical problems.

Contact Information
email: emilia.entcheva@sunysb.edu
url: http://www.bme.sunysb.edu/bme/people/faculty/e_entcheva.html

 

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